Archive for November, 2008

Mind the gap please!

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Nanoscale tubular interconnections between plant cells, called plasmodesmata, have been recognised for some time. But it is only fairly recently that similar connections have been observed between animal cells (Rustom et al, Science, vol 303, p 1007). Since that landmark paper, these “tunneling nanotubes” or membrane nanotubes, as some researchers term them, have been observed in a number of different types of tissues. At first their function was not clear but a number of studies are now casting light on their function between cells.

Unlike gap junctions between cells which have a channel of around 0.5nm to 2nm, just large enough for ions and very small molecules, membrane nanotubes are between 50nm and 200nm in diameter with a channel large enough for proteins and many biomolecules, and even cell organelles, to pass through. They can also span distances of several cell diameters, passing round obstacles between cells.

University of Pittsburg researchers have suggested that the membrane nanotubes may be a route for signalling between dendritic cells as part of the immune system recognition of toxins and infective agents. A team at the University of Frankfurt has observed nanotube interconnections between heart cells and progenitor cells in culture and suggest a transfer via the nanotubes of signalling molecules and transcription factors that may have a role in transforming the progenitor cells. Another team at the University of
Western Australia has recently observed nanotube interconnections between dendritic cells in mouse corneas.

However, the nanotubes may also have a role in allowing disease to propagate. Researchers at Imperial College have observed labelled protein moving from HIV-infected cells to health cells along the nanotubes. A study by the US National Institutes of Health suggests that the nanotubes may have a role in transmission of prion diseases between cells. More recently, prostate cancer cells have been observed passing material from one to another though membrane nanotubes.

Full story in the New Scientist.

Detecting superbug drug resistance nanomechanically

mrsa-green.jpgNew research using microcantilever arrays to investigate how antibiotics interact with mucopeptides, an important constituent of bacterial cell walls, may help speed up the development of new and more potent antibiotics, especially against “superbugs”.

Rachel McKendry, of the London Centre for Nanotechnology (LCN), and co-workers investigated how the antibiotic vancomycin interacted with microcantilevers that had been coated with an amino acid sequence that occurs naturally in mucopeptides from the cell walls of bacteria and then compared these measurements with those from mucopeptides from vancomycin-resistant bacteria. The data shows that vancomycin has different binding constants and causes different surface stress with each mucopeptide. The team suggests that changes in the surface stress cause mechanical disruption of both the bacterial membrane and the cell wall, which eventually leads to the destruction of the bacteria.

Measuring the mechanical stress induced on the bacterial cell walls by antibiotics, and their binding properties, may give new impetus to the development of more potent antibiotics as well as understanding the interaction between antibiotics and bacteria at a fundamental level.

Source: Nature Nanotechnology

Lining up collagen nanofibres for synthetic cartilage

electrospun-collagen-green.jpgCollagen fibres in the natural cartilage protecting the knee are aligned in a parallel orientation. Achieving this configuration, and therefore optimum functionality, in a synthetic cartilage is not easy because collagen is a natural polymer that is difficult to control. Now a student at the Universitat Politècnica de Catalunya’s School of Industrial and Aeronautic Engineering at Terrassa has managed to achieve this desired effect using electrospun collagen nanofibres.

Camila Flor extruded collagen onto a nonconductive material placed between the two grounded electrospinning collecting plates and believes that the parallel orientation of the nanofibres may be related to the ratio of their diameter to the distance between the collecting plates.

To differentiate chondrocytes from stem cells into functional cartilage, the correct configuration of the scaffold material is important and Camila Flor’s work is an important step in engineering cartilage that might in future be used for knee protection in patients with protheses. The work is part of a larger project, under the supervision of Dr. Juan Hinestroza of Cornell University and funded by the Morgan Family Tissue Engineering Fund.

Source: Science Daily

Molecular trees branch out into biosensing

avidin-biotin-small-green.jpgResearchers in South Korea have recently constructed nanotubular structures from branched hydrocarbon chains with attached pyrene groups. By adding cyclodextrins the branches rearrange from a vesicular structure to nanoscale tubes with cyclodextrin “cuffs”. The development is interesting in that the pyrene groups fluoresce and the cyclodextrin “cuffs” can be further linked with a variety of functional groups that “dangle” from the tubes into solution and can thus form useful surfaces for biosensing.

The team, led by Chulhee Kim and Chiyoung Park at Inha University, demonstrated this biosensing ability by attaching biotin to the surfaces of the nanotubes. Biotin binds specifically to the proteins avidin and streptavidin. By adding streptavidin bound to gold nanoparticles, the gold was brought into the vicinity of the pyrene groups “switching them off”. If a mixture of avidin and gold-bound streptavidin are added, the avidin binds preferentially to the biotin allowing the gold-streptavidin only to bind to sites not occupied by the avidin. The level of fluorescence is, therefore, related to the avidin concentration.

The team also suggest that the ability of the nanotubes to bind metal nanoparticles could also have potential applications in nanoelectronics. 

Source: Nanowerk

Abstract

Fibre optic DNA

dna.jpgResearchers at Gothenburg’s Chalmers University of Technology have succeeded in making self-assembling DNA strands capable of guiding light along their length. The team, led by Bo Albinsson, used a mixture of DNA and light-sensitive molecules called YO chromophores to make strands with a light absorbing molecule at one end and a light emitting molecule at the other. In testing the assembled strands, the team found that they transmitted around 30% of the light received by the absorbing chromophore to the emitting chromophore. The system resembles the photonic mechanisms that organisms such as algae use to transport light to parts of the cell where the energy can be converted.

While it is currently impossible to know exactly where the chromophores insert themselves into the DNA strands during self assembly, researchers believe that the scale distances involved may offer opportunities to develop the system for use in nanoscale electronics interconnects, molecular computers and artificial photosynthetic systems.

Source: New Scientist

Paper: Journal of the American Chemical Society

Electric eels inspire artificial electrocyte cells

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One of the great challenges in designing very small implants and devices to work inside the human body is finding a suitable source of power. Now researchers at the US National Institute of Standards and Yale University inspired by the mechanisms of electrical energy production in the electric eel, Electrophorus electricus, have described a method for producing artificial cells that can utilise the body’s biological ion concentration gradients.

Jian Lu from the Department of Chemical Engineering, Yale University, and David Lavan of NIST calculated the conversion of ion concentration gradients into action potentials across different nanoscale conductors in a model electrogenic cell and, using parameters extracted from their numerical model, designed an artificial cell based on the optimum selection of these conductors. They suggest that the level of power output attainable from the system could be sufficient to power novel miniaturised medical devices such as retinal implants.

Read more at Science Daily

Nanoporous ceramics offer new hope for dialysis

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One of the problems with implanting material into the human body is that proteins tend to build up on the surfaces of the implanted material. In the case of applications like biosensing surfaces, e.g. for glucose monitoring in diabetes, and membranes this can cause significant problems.

Now a new study by researchers at North Carolina State University led by Dr Roger Narayan, has found that nanoporous ceramic membranes can avoid both protein build-up and rejection by the body. The researchers hope that this may open up new possibilities in developing dialysis membranes, as well as other implant surfaces, where poor biocompatibility has proved a problem in the past.

Source: PhysOrg.com

Exploding nanotubes target tumours

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There are a number of current approachs that are evaluating the potential of carbon nanotubes as potential delivery vehicles for drugs but Dr Balaji Panchapakesan at the
University of Delaware has come up with a new approach.

His idea is to hydrate them before injecting them into a tumour site and then target them with carefully tuned laser light which causes the trapped water to absorb energy and boil, causing the nanotubes to “explode”, heating and destroying the surrounding cancer tissue. The nanotubes can, additionally, be labelled with antibodies that bind to specific cancer cells and anticancer drugs added to the water.

Read the patent application.

Source: New Scientist